Menteric multiple alignment   Menteric::PsaePAO1

Displays a multiple alignment of the Pseudomonas aeruginosa PAO1 genome with related bacteria.

Address or gene name in the PsaePAO1 (reference) genome:

Address range: 1-6264404 (including the plasmids). The complete gene list can be found here.

Conservation criterion for drawing the conserved regions in the alignment:

Types of functional sites in the display:       Genes     Promoters     Protein binding sites

Genomes to be included in the display (up to 11); by default, the first 11 genomes are selected.

PsaePA7   (Pseudomonas aeruginosa PA7; GP) PsaeLES   (Pseudomonas aeruginosa LES; GP)
PsaePA14   (Pseudomonas aeruginosa PA14; GP) PsenL48   (Pseudomonas entomophila L48; GP)
PsflPfO1   (Pseudomonas fluorescens PfO-1; GP) PsflPf5   (Pseudomonas fluorescens Pf-5; GP)
Psmeymp   (Pseudomonas mendocina ymp; GP) PspuW619   (Pseudomonas putida W619)
PspuF1   (Pseudomonas putida F1; GP) PspuKT244   (Pseudomonas putida KT2440; GP)
PsstA1501   (Pseudomonas stutzeri A1501; GP) Pssy1448A   (Pseudomonas syringae 1448A; GP)
PssyB728a   (Pseudomonas syringae B728a; GP) PssyDC300   (Pseudomonas syringae DC3000; GP)
  (G = GenBank Genome page; P = GenBank protein list)

User sequence (optional). No FASTA headers, please!

Output format:       PostScript     PDF

Please NOTE that some queries may require more than 30s to complete!

Page last revised Jan 7 2010.