Menteric::PsaePAO1

Displays a multiple alignment of the Pseudomonas aeruginosa PAO1 genome with related bacteria.

Address or gene name in the PsaePAO1 (reference) genome:

Address range: 1-6264404 (including the plasmids). The complete gene list can be found here.

Conservation criterion for drawing the conserved regions in the alignment: letter agreement (agree) information content (infocon) phylogenetic distance (phylogen) distance from a center sequence (kkno) distance from an unknown center sequence (kunk)

Types of functional sites in the display:       Genes     Promoters     Protein binding sites
 

Genomes to be included in the display (up to 11); by default, the first 11 genomes are selected.

PsaePA7   (Pseudomonas aeruginosa PA7; GP)	PsaeLES   (Pseudomonas aeruginosa LES; GP)
PsaePA14   (Pseudomonas aeruginosa PA14; GP)	PsenL48   (Pseudomonas entomophila L48; GP)
PsflPfO1   (Pseudomonas fluorescens PfO-1; GP)	PsflPf5   (Pseudomonas fluorescens Pf-5; GP)
Psmeymp   (Pseudomonas mendocina ymp; GP)	PspuW619   (Pseudomonas putida W619)
PspuF1   (Pseudomonas putida F1; GP)	PspuKT244   (Pseudomonas putida KT2440; GP)
PsstA1501   (Pseudomonas stutzeri A1501; GP)	Pssy1448A   (Pseudomonas syringae 1448A; GP)
PssyB728a   (Pseudomonas syringae B728a; GP)	PssyDC300   (Pseudomonas syringae DC3000; GP)
(user)

  (G = GenBank Genome page; P = GenBank protein list)

User sequence (optional). No FASTA headers, please!

Output format:       PostScript     PDF
 

Please NOTE that some queries may require more than 30s to complete!