Enteric PIPs   Enteric :: S1ty001

Displays pairwise alignments of the Salmonella typhi CT18 genome with related bacteria.

Address or gene name in the S1ty001 (reference) genome:

Address range: 1-5133713 (including the plasmids). The complete gene list can be found here.

Genomes to be included in the display (up to 11); by default, the first 11 genomes are selected.

S1ty002   (Salmonella typhi Ty2; GP) S1tm001   (Salmonella typhimurium LT2; GP)
S1tm002   (Salmonella typhimurium SL1344) S1tm007a   (Salmonella typhimurium 14028)
S1tm007f   (Salmonella typhimurium 14028) S1pa001   (Salmonella paratyphi A; GP)
S1pb001   (Salmonella paratyphi B; GP) S1pb002   (Salmonella paratyphi B SARB47)
S1pc001   (Salmonella paratyphi C) S1en001   (Salmonella enteritidis)
S1en002   (Salmonella enteritidis PT4) S1en003   (Salmonella enteritidis)
S1en007   (Salmonella enteritidis P125109; GP) S1du001   (Salmonella dublin; GP)
S1ga001   (Salmonella gallinarum str. 287/91; GP) S1ga002   (Salmonella pullorum)
S1np001   (Salmonella Newport SL254; GP) S1np002   (Salmonella Newport SL317)
S2sa001   (Salmonella salamae (ssp. II)) S3di001   (Salmonella diarizonae (ssp. IIIb))
S3ar001   (Salmonella arizonae (ssp. IIIa); GP) S4ho001   (Salmonella houtenae (ssp. IV))
S5bo001   (Salmonella bongori) EccoK12   (Escherichia coli K12; GP)
EccoO157   (Escherichia coli O157:H7; GP) EccoCFT73   (Escherichia coli CFT073; GP)
Ecco042   (Escherichia coli 042) EccoE2348   (Escherichia coli E2348/69; GP)
Shfl2a   (Shigella flexneri 2a; GP) ShdyM1316   (Shigella dysenteriae M131649; GP)
Shso53G   (Shigella sonnei 53G) Klpn   (Klebsiella pneumoniae; GP)
Ewca   (Erwinia carotovora SCRI1043) Ewam   (Erwinia amylovora)
Srma   (Serratia marscensens) YrpsCO92   (Yersinia pestis CO92; GP)
Yren8081   (Yersinia enterocolitica 8081; GP) VbchO1   (Vibrio cholerae; GP)
  (G = GenBank Genome page; P = GenBank protein list)

User sequence (optional). No FASTA headers, please!

Please NOTE that some queries may require more than 30s to complete.

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Page last revised Jan 7 2010.